Antibiotic Resistance Gene Primers


LCPDb-ARG (Antibiotic Resistance Genes) is a subset of LCPDb - here we present primers extracted from published papers and analysed by our pipeline.
Original article available here

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Genes conferring resistance to: Glycopeptides


vanA

10 primer pair(s) available

  • Primer Pair 1
    • Specificiy: 1.0
    • Efficacy: 0.9
    • Prod. Length: 545
  • Primer Pair 2
    • Specificiy: 0.0
    • Efficacy: 0.0
    • Prod. Length: 732
  • Primer Pair 3
    • Specificiy: 0.0
    • Efficacy: 0.0
    • Prod. Length: 314
  • Primer Pair 4
    • Specificiy: 1.0
    • Efficacy: 0.7
    • Prod. Length: 713
  • Primer Pair 5
    • Specificiy: 1.0
    • Efficacy: 0.5
    • Prod. Length: 1030
  • Primer Pair 6
    • Specificiy: 1.0
    • Efficacy: 0.85
    • Prod. Length: 187
  • Primer Pair 7
    • Specificiy: 0.0
    • Efficacy: 0.0
    • Prod. Length: 1030
  • Primer Pair 8
    • Specificiy: 0.0
    • Efficacy: 0.0
    • Prod. Length: 163
  • Primer Pair 9
    • Specificiy: 1.0
    • Efficacy: 0.85
    • Prod. Length: 377
  • Primer Pair 10
    • Specificiy: 0.98
    • Efficacy: 0.75
    • Prod. Length: 931
vanG

1 primer pair(s) available

  • Primer Pair 1
    • Specificiy: 0.92
    • Efficacy: 0.8
    • Prod. Length: 941
vanC

7 primer pair(s) available

  • Primer Pair 1
    • Specificiy: 0.93
    • Efficacy: 0.71
    • Prod. Length: 430
  • Primer Pair 2
    • Specificiy: 0.88
    • Efficacy: 0.29
    • Prod. Length: 822
  • Primer Pair 3
    • Specificiy: 1.0
    • Efficacy: 1.0
    • Prod. Length: 109
  • Primer Pair 4
    • Specificiy: 1.0
    • Efficacy: 0.29
    • Prod. Length: 485
  • Primer Pair 5
    • Specificiy: 0.0
    • Efficacy: 0.0
    • Prod. Length: 796
  • Primer Pair 6
    • Specificiy: 1.0
    • Efficacy: 0.58
    • Prod. Length: 339
  • Primer Pair 7
    • Specificiy: 0.0
    • Efficacy: 0.0
    • Prod. Length: 820
vanB

9 primer pair(s) available

  • Primer Pair 1
    • Specificiy: 1.0
    • Efficacy: 1.0
    • Prod. Length: 368
  • Primer Pair 2
    • Specificiy: 0.99
    • Efficacy: 1.0
    • Prod. Length: 634
  • Primer Pair 3
    • Specificiy: 1.0
    • Efficacy: 1.0
    • Prod. Length: 220
  • Primer Pair 4
    • Specificiy: 1.0
    • Efficacy: 0.11
    • Prod. Length: 430
  • Primer Pair 5
    • Specificiy: 1.0
    • Efficacy: 0.11
    • Prod. Length: 433
  • Primer Pair 6
    • Specificiy: 0.0
    • Efficacy: 0.0
    • Prod. Length: 192
  • Primer Pair 7
    • Specificiy: 0.99
    • Efficacy: 1.0
    • Prod. Length: 529
  • Primer Pair 8
    • Specificiy: 0.99
    • Efficacy: 1.0
    • Prod. Length: 446
  • Primer Pair 9
    • Specificiy: 1.0
    • Efficacy: 1.0
    • Prod. Length: 647
vanD

2 primer pair(s) available

  • Primer Pair 1
    • Specificiy: 1.0
    • Efficacy: 0.75
    • Prod. Length: 230
  • Primer Pair 2
    • Specificiy: 1.0
    • Efficacy: 0.88
    • Prod. Length: 500
vanE

1 primer pair(s) available

  • Primer Pair 1
    • Specificiy: 1.0
    • Efficacy: 1.0
    • Prod. Length: 430
vanC-2

2 primer pair(s) available

  • Primer Pair 1
    • Specificiy: 0.97
    • Efficacy: 0.71
    • Prod. Length: 439
  • Primer Pair 2
    • Specificiy: 0.91
    • Efficacy: 0.5
    • Prod. Length: 484
vanC-3

1 primer pair(s) available

  • Primer Pair 1
    • Specificiy: 0.8
    • Efficacy: 0.08
    • Prod. Length: 224